FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926940

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926940
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469478
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC9190.19574932158695404No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6080.1295055359356562No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT5810.12375446772798725No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5630.11992042225620796No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG5480.11672538436305853No Hit
CGTATGCCGACTACTAGCACCGCTTCCCAGAAC5060.1077792782622402No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)