FastQCFastQC Report
Wed 31 May 2023
EGAF00007926942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458201
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22370.48821368787933683No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC9500.20733258984594097No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6450.14076791626382307No Hit
CGTATGCCGACTACTAGCACCGCTTCCCAGAAC5770.12592726772748206No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT5510.12025290211064577No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG5100.11130486402255778No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)