FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442849
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21510.48571860837441205No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT11410.2576498987239443No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG8860.20006819480229152No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT6460.14587364993485363No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6230.14068000605172418No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5610.12667974862763606No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5480.12374421078064984No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC4860.10974395335656172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)