FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007926960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434227
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21660.498817438805049No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15210.35027761977030447No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6720.15475776494782684No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAATCT5230.12044391527933547No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAATCC5110.11768038376240998No Hit
CGTCGCCAGCGTGCAATCGACAAACGCCAGCGT4950.11399567507317601No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)