FastQCFastQC Report
Wed 31 May 2023
EGAF00007926962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438792
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21720.4949953508723951No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15710.35802840525807217No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6820.15542671698663604No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAATCC5440.12397673613010265No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAATCT5240.11941876789002535No Hit
CGTCGCCAGCGTGCAATCGACAAACGCCAGCGT4930.11235391711790553No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)