FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474083
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG24640.5197402142662783No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10540.22232393905708492No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6640.14005986293539316No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC6110.12888038592398376No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5830.12297424712550335No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT5790.12213051301143471No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5120.10799796660078509No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5080.10715423248671646No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)