FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524889
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG20940.39894149048656No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6440.12269260738937185No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG6270.11945382738064618No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT5980.11392884971870242No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5680.10821335558565716No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC5580.10630819087464205No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)