FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512658
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24440.47673107607800913No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG20220.39441499011036596No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5940.11586671816298584No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT5860.11430622364227223No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5750.11216054367629102No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC5700.11118523460084502No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)