FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007926986

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926986
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences507235
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23650.4662533145386261No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT18290.3605823730617958No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10300.20306169724092385No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT9550.1882756513253226No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC9150.18038976017033526No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG8740.17230672173647324No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT8600.16954665983222766No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT8510.16777233432235553No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC8400.165603714254734No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG8100.15968929588849348No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT7960.15692923398424793No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA6660.1313000877305391No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6400.12617425847979732No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGGAA6320.12459708024879987No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6260.12341419657555176No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG5870.11572545269943912No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA5650.11138821256419609No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5600.11040247616982267No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTACC5350.10547379419795558No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG5130.10113655406271255No Hit

[OK]Adapter Content

Adapter graph