FastQCFastQC Report
Sun 21 May 2023
EGAF00007926994

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926994
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499854
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24740.4949445238009499No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC14780.29568634041140013No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG12740.25487442333161286No Hit
GGTCCGGGCATTAACCCAATCAGCAAAACCGAA6040.12083528390289965No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5900.11803446606409071No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)