FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007926996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007926996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518730
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGAACCTACTACTGATTACGGCGGTGACTCC14690.2831916411235132No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG13620.26256433982996935No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6220.11990823742602125No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA6190.11932990187573497No Hit
GGTCCGGGCATTAACCCAATCAGCAAAACCGAA5990.11547433154049314No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG5380.10371484201800552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)