FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927004

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927004
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences607669
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21750.35792512041917557No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13140.21623614171530883No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG12910.21245118641892213No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8810.1449802441789856No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8670.1426763583464024No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7270.11963750002057041No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6810.11206758942779704No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6540.10762438103638658No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)