FastQCFastQC Report
Sun 21 May 2023
EGAF00007927022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences560833
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG83841.4949191648850906No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18070.3221992999698663No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14650.26121858021906696No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8590.15316502416940517No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7730.13783069113265445No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7620.13586932295353518No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6530.1164339473604442No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC6360.11340274199271441No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6350.11322443579461267No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG6290.11215459860600215No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5780.10306098250281279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)