FastQCFastQC Report
Sun 21 May 2023
EGAF00007927030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508754
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG88771.744851146133495No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA26500.5208804255101679No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA12650.24864669368692924No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA10540.2071728182972517No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8830.17356128895301068No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6110.1200973358440425No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG5310.10437264375316951No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5110.10044147073045126No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5090.10004835342817943No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)