FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences543585
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28270.5200658590652796No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18540.34106901404564144No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8530.1569211806801144No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8200.1508503729867454No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG7360.1353974079490788No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)