FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences516761
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG87011.683757094672392No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17480.338260820766273No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11630.22505568338167933No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9550.18480496786715717No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7800.1509401831794582No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7450.1441672262419184No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6090.11784945071319236No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6010.11630134627032612No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5970.11552729404889302No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)