FastQCFastQC Report
Sun 21 May 2023
EGAF00007927057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426824
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6290.14736753322212434No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG4870.11409855115926003No Hit
GACGGTCTGGATAGCCGCGTCTACGGTGGACACCGGCGGCGGGG4370.10238412085543457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)