FastQCFastQC Report
Wed 31 May 2023
EGAF00007927064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451611
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60951.3496128305112143No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11450.2535367827621559No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9000.19928655413619245No Hit
CGTTCTCGCCACGAGAACACCTCTCAGGTTC6960.1541149351986555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)