FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472729
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29930.6331323020165888No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10240.21661459313898662No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9310.1969415880980435No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8370.1770570453684881No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4920.10407654279724747No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4890.1034419297314106No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4880.1032303920427983No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC4850.10259577897696144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)