FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007927097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426469
Sequences flagged as poor quality0
Sequence length44
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT51621.210404507713339No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC40920.9595070216123565No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA29700.6964163866541296No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA28940.6785956306320037No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA26900.630760969730508No Hit
GCCCTGACCGCGCGGGCCGGTGGACGGACCCTCACCCGGGTCGT23360.5477537640485005No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT22140.5191467609603512No Hit
GGACTGGTCCGGCAGGGTATCCGGGAAAGCCGCACGTGCCGCAC21060.4938225287183828No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT20930.49077424150407184No Hit
AACGCAGGCACCGCGACGACGACGGGACGGTGGTGGGGTCGGTT19950.46779484558080425No Hit
TTCCTGGTGGTATTCGAAATAGTCTGCTTCGCCGACCGGGTGGA19810.4645120747346232No Hit
ACCCTGACCGCGCGGGCCGGTGGACGGGCCTTCGCCCGGGTCAT16550.38807041074497794No Hit
CGGTTCGCCATCCGGACCGCCTTCCTGGTGATACTCGAAGTAGT15530.3641530802942301No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT12430.2914631544145061No Hit
GGTGGACGGGCCTTCGCCCGGGTCGTCAGCCGGACCCTGCTCGA10930.25629060963399447No Hit
CGGCGGCGGTTCCTGATAACCCTGGTACGGGGCTTGCGGAGCCG10530.2469112643591914No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT9480.22229048301283327No Hit
GGCAATATTTAAATATGCTCGTCAGGTGGACGGACCTTCGCCCG9210.2159594249523412No Hit
TGGCGGCGGTTCCTGGTAGCCCTGATACGGTGCCTGCGGCGCCG9090.21314562136990028No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8330.1953248653477744No Hit
GTGCTGGGAACGTGGGGTCCACGGGCCTGCATAACCCGGGTAGG8270.19391796355655394No Hit
GGTGGACGGACCTTCGCCCGGGTCATCCGCCGGGCCCTGTTCGA8190.19204209450159332No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA7860.18430413464988077No Hit
ACGACGACCGCCGTCGCCCTGACCACGTGGGCCGGTGGACGGAC7350.17234546942450682No Hit
GTGCTGGCTACGCGGGGTCCACGGACCAGCATAGCCCGGGTAGG6630.15546264792986125No Hit
CGGGCCTTCGCCCGGGTCATCAGCCGGGCCCTGTTCGATCGCAC6450.15124194255619988No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG6420.15053849166058964No Hit
GCCCTGACCGCGTGGGCCGGTGGACGGACCCTCACCCGGGTCGT6380.14960055713310932No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG6150.14420743360009755No Hit
GCTCAGCTGAGACGGCTGCATGTTTTTGCCGGCCAGGTGTGCTT5960.1397522445945661No Hit
CTGACCACGGTGTTTACCGAACCAACCACCTTTTTTGCGACGGC5930.13904879369895584No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT5900.13834534280334562No Hit
TTCCTGGTGATACTCAAAGTAATCAGCTTCACCCACCGGATGGA5240.12286942309992051No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG4910.11513146324820796No Hit
CACGCAGGCACCACGACGGCGACGAGACGGCGGCGGAGTAGGTT4910.11513146324820796No Hit
CTGTTCGGTTTCCAGTTCGCCTACGCTCACTTTGGTGTTGTTAC4890.1146624959844678No Hit
TGTGACATTTAAATTGGAGTATCAGGTAGACGGGCCTTCGCCCG4580.10739350339649542No Hit
GGCATCGGTGAAGCCAGTGCCGAATGCGTCACCCAGACCTTTGA4440.10411073255031432No Hit
GGCGATCAGGTCGGACAGGTTTTTCTTGATAACTTCGCCAGACG4340.10176589623161354No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA4330.10153141259974348No Hit
CAGGTACGGCGGATAGGTGTGGGCTTCCGCTTCGCCACGGTCTG4320.1012969289678734No Hit
AGAGGACGGACGGCTACCCTGTTTGCCGTTCCAGTAGGCCTGTG4290.10059347807226317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)