FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434972
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62681.4410122950442787No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13690.3147329023477373No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11170.2567981387307689No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10470.24070514883716654No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9130.20989856818369917No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9080.2087490689055847No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG8360.1921962793007366No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC7390.16989599330531618No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA7050.16207939821413792No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG6990.16069999908040056No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6880.15817110066854878No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6760.1554123024010741No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC6430.1478256071655187No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6340.14575650846491267No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6320.1452967087536669No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG6320.1452967087536669No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6160.14161831106370065No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC6130.14092861149683197No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG5590.12851401929319586No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5260.1209273240576405No Hit
AAACTGTCCTCTGGCTACCGCATCAACCGTG4540.10437453445279235No Hit

[OK]Adapter Content

Adapter graph