FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007927142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500518
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT36290.7250488493920298No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30500.6093686940329819No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11520.23016155263147378No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10910.21797417875081415No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC10250.2047878397979693No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8480.16942447624261264No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7330.14644827958235268No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7290.14564910752460453No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5910.11807767153229254No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5690.11368222521467759No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5110.10209423037732909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)