FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences436302
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10540.24157578924689777No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9160.20994632158459048No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5250.12032949654138647No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5030.11528711763869981No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4730.10841114640776342No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG4400.10084757805373341No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)