FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007927180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500168
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG55291.1054285759984646No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18100.36187840885462486No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15310.306097151357144No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8770.17534108539530718No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6110.12215895459125733No Hit
GGCGCAGGCCCGAGCGCCGCTTGTTGCTCTG5350.10696406007581452No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)