FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510355
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG52711.0328104946556809No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18580.364060310960018No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15630.30625740905840054No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9090.1781113146731197No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6430.1259907319414917No Hit
GGCGCAGGCCCGAGCGCCGCTTGTTGCTCTG6140.12030841277150219No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)