FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501551
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG55031.0971964964679564No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13280.26477865660720445No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6640.13238932830360223No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5350.10666911241329396No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)