FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463934
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50891.0969232692581272No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29790.6421171977048459No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7900.17028284195596788No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7490.16144537800635436No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7110.15325455776037109No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5300.11424038764134554No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5080.10949833381472364No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)