FastQCFastQC Report
Sun 21 May 2023
EGAF00007927198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462952
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24620.5318045931327653No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12490.2697903886364029No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6400.13824327360071886No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6280.13565121222070536No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5590.12074685928562788No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5250.11340268537558969No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4970.10735454215555826No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)