FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465601
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23250.49935459760610484No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13350.2867261883028602No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7340.15764570952381976No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6540.14046361584274947No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5800.12457017918775948No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5350.11490525149215745No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5260.11297226595303705No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)