FastQCFastQC Report
Sun 21 May 2023
EGAF00007927208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences529124
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25490.48173963003001186No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11740.22187615757365003No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11630.21979724979399912No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10050.18993657441355902No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7900.1493033769022006No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7580.1432556451795798No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5560.10507933868053614No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)