FastQCFastQC Report
Wed 31 May 2023
EGAF00007927210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454402
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49401.0871431023631057No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7760.17077389624165387No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5670.12477938037244553No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4950.10893437969023023No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)