FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007927216

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927216
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458175
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22140.4832214765100671No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11730.2560157145195613No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9480.20690784089048947No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4860.10607300703879521No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)