FastQCFastQC Report
Sun 21 May 2023
EGAF00007927218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences444821
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45831.0303020765656299No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11780.2648256264879581No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8610.19356100543814253No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5060.11375362224355415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)