FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007927284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491091
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50931.0370786677010981No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT32690.6656607431209287No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA20150.41031091997206215No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC16970.34555713706828267No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG14760.30055529423263716No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT12180.24801920621636314No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10450.21279151929072207No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA9600.1954831182000892No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8600.1751202933875799No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8520.17349126740257914No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6510.1325619895294355No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC6050.12319509011568121No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5910.12034429464192992No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5770.11749349916817861No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC5760.11728987092005352No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5730.11667898617567823No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5640.1148463319425524No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5180.10547943252879811No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5160.10507217603254794No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG5150.10486854778442285No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4940.1005923545737959No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4930.10038872632567081No Hit

[OK]Adapter Content

Adapter graph