FastQCFastQC Report
Wed 31 May 2023
EGAF00007927298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527894
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18070.3423035685194376No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14670.277896698958503No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8020.15192443937608685No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6940.1314657866920253No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5980.11328031763952612No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5760.10911281431499505No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5620.10646076674483892No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)