FastQCFastQC Report
Wed 31 May 2023
EGAF00007927300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500843
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40500.8086366386272744No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17030.34002671495857983No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7420.14815021873121917No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6720.13417378300185887No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5650.11280980267269383No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5150.10282663429457935No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5050.10083000061895644No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)