FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007927328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences526745
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24420.4636019326239452No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13880.26350511158150525No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12220.23199081149322728No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11580.2198407198929273No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10800.20503279575506175No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10510.19952728549867582No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10330.19611007223609145No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7150.13573930459710107No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6780.12871503289067765No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA5430.10308593342129493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)