FastQCFastQC Report
Wed 31 May 2023
EGAF00007927374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501752
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44770.892273473747987No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33330.6642723895470273No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10290.20508139479264656No Hit
GATGAACGTAAACGCCACACCAAAATCCACC6720.13393070680336103No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6010.11978028986431545No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5970.11898308327620019No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5910.11778727339402734No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5750.11459844704156635No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5140.10244104657280888No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5140.10244104657280888No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5020.10004942680846315No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)