FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences537151
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT35450.6599633994910183No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15280.2844637727566364No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10700.1991991078858645No Hit
GATGAACGTAAACGCCACACCAAAATCCACC7590.14130104942558053No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6540.12175347341808913No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6520.12138113863699405No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6470.12045030168425638No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5960.11095576476633201No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5440.10127506045786007No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5430.10108889306731256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)