FastQCFastQC Report
Sun 21 May 2023
EGAF00007927444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439910
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46091.0477143051987907No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT26600.604669136868905No Hit
ATGTCCAACATGGACATCGATGGTATTAACA8890.2020867904798709No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5280.12002455047623378No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5150.1170694005592053No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5030.11434156986656363No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC4540.1032029278716101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)