FastQCFastQC Report
Sun 21 May 2023
EGAF00007927450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420017
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT49981.1899518352828578No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21650.5154553268082006No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG12260.2918929471902328No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10860.2585609630086401No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9950.2368951732906049No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG9690.23070494765688054No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8910.2121342707557075No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG6860.16332672248980398No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG6700.15951735286905053No Hit
GTGGCAACCAACGAAATGAAGGTTATCAACG5900.1404705047652833No Hit
CGTGACACCACTCACATTTCCCAGAGCGCAC5550.13213750871988514No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5440.12951856710561716No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC5230.12451876947837826No Hit
TCCTACACCAACGGCAAACTGACTATCACCC4980.11856662944595099No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4910.11690003023687137No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG4790.11404300302130628No Hit
GGCCTGACTTCTTATGATGAACCGCTGGTTA4720.11237640381222663No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4600.10951937659666156No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC4470.10642426377979938No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG4370.10404340776682848No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4280.10190063735515467No Hit
GATATTCGTGTTTACGGCATGAACGGCTGCA4220.10047212374737213No Hit

[OK]Adapter Content

Adapter graph