FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460782
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50311.0918395249814445No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15750.3418102269619907No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8280.17969451931716085No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8180.1775242956539101No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7090.1538688577244771No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5910.12826021849811842No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5620.1219665698746913No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5320.11545589888493908No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5310.115238876518614No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4970.10786011606356151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)