FastQCFastQC Report
Wed 31 May 2023
EGAF00007927532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451682
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT48341.0702219703242546No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40160.8891211073277218No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA38830.859675612488432No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA19970.44212521198542337No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA17840.3949681413029521No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15440.341833413773407No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11090.24552672012610643No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10300.2280365389809645No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10110.22383003971820883No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG10010.2216160927378111No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA7850.1737948379612205No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG7710.1706953121886637No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG7440.16471765534158989No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6860.15187676285528315No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6460.14302097493369229No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6220.13770750218073777No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5970.1321726347297435No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5810.12863031956110715No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC5510.12198847861991402No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5330.11800337405519813No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG4920.10892619143556749No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)