FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences443861
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG62671.411928509150387No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13490.30392397619975625No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9980.22484516549099834No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8780.1978096746503973No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7750.17460421167888146No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7720.17392832440786643No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7000.15770702990350582No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6900.15545407233345576No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6300.14193632691315525No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6000.135177454203005No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5800.13067153906290485No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5650.1272921027078297No Hit
AAAGTTCCGGTGACCATGACCCGTTACCGCT5640.1270668069508247No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5170.11647790637158931No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5040.11354906153052419No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5020.11309847001651419No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4830.10881785063341903No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC4740.10679018882037396No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC4650.10476252700732888No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTA4460.10048190762423372No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4460.10048190762423372No Hit

[OK]Adapter Content

Adapter graph