FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431572
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61671.4289620271936083No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27270.6318760253213832No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10460.2423697552204499No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8270.1916250359152123No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6100.14134373870408645No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5460.12651423169251017No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5190.12025803342200142No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5170.11979461132788968No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4690.10867248106920745No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4400.10195286070458695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)