FastQCFastQC Report
Sun 21 May 2023
EGAF00007927680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467523
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30680.6562243996552041No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT30540.6532298945720317No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18830.4027609336866849No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA15620.3341012099939468No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTA14860.3178453252567254No Hit
GAAATGGAGAACATCCTGCAGAACCTGACTC12870.27528057443163223No Hit
TCCTACACCAACGGCAAACTGACTATCACCC10550.2256573473390614No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8240.17624801346671715No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8090.17303961516331817No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8000.1711145761812788No Hit
GTGGCAACCAACGAAATGAAGGTTATCAACG7610.16277274059244143No Hit
ATGGGTGCAGACATGGTAGAACTGGACATTC7570.16191716771153505No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA7310.15635594398564348No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7030.15036693381929872No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA6570.1405278456888752No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6280.13432494230230385No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6270.13411104908207724No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6230.13325547620117084No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6090.13026097111799848No Hit
CTGTCTGCTGAGCAGCTGAACGTCACTGACG5910.1264108931539197No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT5320.11379119316055038No Hit
TCTATCGTAGTGACCGGCAACGCAGGTTCCG5160.11036890163692481No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5120.10951332875601844No Hit
CAACAGGATCTGAGCAACCCGACCGCCTCTA5090.10887164909533863No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4990.10673271689307265No Hit
GGCCTGACTTCTTATGATGAACCGCTGGTTA4810.10288263892899387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)