FastQCFastQC Report
Wed 31 May 2023
EGAF00007927720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503225
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30460.6052958418202593No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11030.21918624869591138No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10870.21600675642108402No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10830.21521188335237718No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10290.2044810969248348No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6640.1319489294053356No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6430.12777584579462467No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6120.12161557951214665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)