FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927722

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927722
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506796
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31690.6253009100308605No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10940.2158659500074981No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10730.21172227089400866No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10390.2050134570912162No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10310.20343491266702976No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7160.14127972596468796No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6430.12687550809398654No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5240.10339465978421297No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)