FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490174
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15420.3145821687808819No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12960.26439590839171395No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8990.18340426052789416No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5330.10873689750986383No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5140.10486072292696064No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5140.10486072292696064No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)