FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468837
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46440.9905361564893556No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14790.31546145035481415No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8160.17404769674748366No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5060.107926635483121No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4880.10408734805486769No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)